Publications

Gregor Mendel Institute

Susaki D, Maruyama D, Yelagandula R, et al. (2017) Live-Cell Imaging of F-Actin Dynamics During Fertilization in Arabidopsis thaliana. Methods Mol Biol 1668:47-54.

Backofen R, Costa F, Theis F, et al (2017) MicroRNA as an Integral Part of Cell Communication: Regularized Target Prediction and Network Prediction.  Lecture Notes in Bioengineering: Information- and Communication Theory in Molecular Biology:85-99.

Mittelsten Scheid O (2017) Nicht-Mendelsche Genetik. Nova Acta Leopoldina NF 413: 231-250.

Carlson KD, Fernandez-Pozo N, Bombarely A et al. (2017) Natural variation in stress response gene activity in the allopolyploid Arabidopsis suecica. BMC Genomics 18(1):653.

Zhu W, Hu B, Becker C et al. (2017) Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid. Genome Biol 18(1):157.

Di Mambro R, De Ruvo M, Pacifici E, et al. (2017) Auxin minimum triggers the developmental switch from cell division to cell differentiation in the Arabidopsis root. Proc Natl Acad Sci USA [epub].

Jiang D and Berger F (2017) DNA replication-coupled histone modification maintains Polycomb gene silencing in plants. Science [epub].

Motomura K, Kawashima T, Berger F (2017) A pharmacological study of Arabidopsis cell fusion between the persistent synergid and endosperm. J Cell Sci [epub].

Czedik-Eysenberg A, Rabe F, ... Djamei A (2017) Overrepresentation Analyses of Differentially Expressed Genes in the Smut Fungus Ustilago bromivora during Saprophytic and in planta Growth. Bio Protoc [epub].

Bosch J, Djamei A (2017) Isolation of Ustilago bromivora Strains from Infected Spikelets through Spore Recovery and Germination. Bio Protoc 7(14):e2392.

Lutzmayer S, Enugutti B, Nodine M (2017) Novel small RNA spike-in oligonucleotides enable absolute normalization of small RNA-Seq data. Sci Reports 7:5913.

Valuchova S, Fulnecek J, Prokop Z, et al. (2017) Protection of Arabidopsis blunt-ended telomeres is mediated by a physical association with the Ku heterodimer. Plant Cell 29(6):1533-45.

Nikitaki Z, Pavlopoulou A, Holá M, et al. (2017) Bridging Plant and Human Radiation Response and DNA Repair through an In Silico Approach. Cancers (Basel) 9(6):E65.

Daccord N, Celton JM, Linsmith G, et al. (2017) High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nat Genet 49(7):1099-106.

Kujirai T, Machida S, Osakabe A, et al. (2017) Influence of polynucleosome preparation methods on sedimentation velocity analysis of chromatin. J Biochem 161(4):381-8.

Barbez E, Dünser K, ..., Busch W (2017) Auxin steers root cell expansion via apoplastic pH regulation in Arabidopsis thaliana. Proc Natl Acad Sci USA 114(24):4884-93.

Satbhai SB, Setzer C, ..., Busch W (2017) Natural allelic variation of FRO2 modulates Arabidopsis root growth under iron deficiency. Nat Commun 8:15603.

Wollmann H, Stroud H, Yelagandula R, et al. (2017) The histone H3 variant H3.3 regulates gene body DNA methylation in Arabidopsis thaliana. Genome Biol 18(1):94.

Ikeda Y, Pélissier T, Bourguet P, et al. (2017) Arabidopsis proteins with a transposon-related domain act in gene silencing. Nat Commun. 8:15122.

Rabanal FA, Mandáková T, Soto-Jiménez LM, et al. (2017) Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana. Genome Biol. 18(1):75.

Stoeva D, Göschl C, ..., Busch W (2017) Long-Term Confocal Imaging of Arabidopsis thaliana Roots for Simultaneous Quantification of Root Growth and Fluorescent Signals. Methods Mol Biol. 1610:169-183.

Giovannetti M, Małolepszy A, ..., Busch W (2017) Large-Scale Phenotyping of Root Traits in the Model Legume Lotus japonicus. Methods Mol Biol. 1610:155-167.

Satbhai SB, Göschl C, Busch W (2017) Automated High-Throughput Root Phenotyping of Arabidopsis thaliana Under Nutrient Deficiency Conditions. Methods Mol Biol. 1610:135-153.

Yelagandula R, Osakabe A, Axelsson E, et al. (2017) Genome-Wide Profiling of Histone Modifications and Histone Variants in Arabidopsis thaliana and Marchantia polymorpha. Methods Mol Biol. 1610:93-106.

Hagmann J, Becker C (2017) Assessing Distribution and Variation of Genome-Wide DNA Methylation Using Short-Read Sequencing. Methods Mol Biol. 1610:61-72.

Gregor Mendel Institute of
Molecular Plant Biology GmbH


Dr. Bohr-Gasse 3
1030 Vienna, Austria

T: +43 1 79044-9000
F: +43 1 79044-9001
E: office(at)gmi.oeaw.ac.at

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