2010

Publications

Atwell S, Huang YS, Vilhjálmsson BJ, et al. (2010) Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature 465(7298):627-31.

Baubec T, Dinh HQ, Pecinka A, et al. (2010) Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic states in Arabidopsis. Plant Cell 22(1):34-47.

Baxter I, Brazelton JN, Yu D, et al. (2010) A coastal cline in sodium accumulation in Arabidopsis thaliana is driven by natural variation of the sodium transporter. AtHKT1;1. PLoS Genet 6(11):e1001193.

Brachi B, Faure N, Horton M, et al. (2010) Linkage and association mapping of Arabidopsis thaliana flowering time in nature. PLoS Genet 6(5):e1000940.

Bulankova P, Riehs-Kearnan N, Nowack MK, et al. (2010) Meiotic progression in Arabidopsis is governed by complex regulatory interactions between SMG7, TDM1, and the meiosis I-specific cyclin TAM. Plant Cell 22(11):3791-803.

Cooper EA, Whittall JB, Hodges SA, et al. (2010) Genetic variation at nuclear loci fails to distinguish two morphologically distinct species of Aquilegia. PLoS ONE 5:e8655.

Förster AM, Hetzl J, Müllner C, et al. (2010) Analysis of bisulfite sequencing data from plant DNA using CyMATE. Methods Mol Biol 631:13-22.

Förster AM, Mittelsten Scheid O (2010) Analysis of DNA methylation in plants by bisulfite sequencing. Methods Mol Biol 631:1-11.

Furner IJ, Matzke M (2010) Methylation and demethylation of the Arabidopsis genome. Curr Opin Plant Biol 14(2):137-41.

Gao Z, Liu H-L, Daxinger L, et al. (2010) An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation. Nature 465(7294):106-9.

Kanno T, Bucher E, Daxinger L, et al. (2010) RNA-directed DNA methylation and plant development requires an IWR1-type transcription factor. EMBO Rep 11(1):65-71.

Köhler C, Mittelsten Scheid O, Erilova A (2010) The impact of the triploid block on the origin and evolution of polyploid plants. Trends Genet 26(3):142-8.

Lang-Mladek C, Popova O, Kiok K, et al. (2010) Transgenerational inheritance and resetting of stress-induced loss of epigenetic gene silencing in Arabidopsis. Mol Plant 3(3):594-602.

Li Y, Huang Y, Bergelson J, et al. (2010) Association mapping of local climate-sensitive quantitative trait loci in Arabidopsis thalianaProc Natl Acad Sci USA 107(49): 21199-204.

Matzke AJ, Watanabe K, van der Winden J, et al. (2010) High frequency, cell type-specific visualization of fluorescent-tagged genomic sites in interphase and mitotic cells of living Arabidopsis plants. Plant Methods 6:2.

Matzke AJ, Weiger TM, Matzke M (2010) Ion channels at the nucleus: Electrophysiology meets the genome. Mol Plant 3(4):642-52.

Milcevicova R, Gosch C, Halbwirth H, et al. (2010) Erwinia amylovora-induced defense mechanisms of two apple species that differ in susceptibility to fire blight. Plant Sci 179:60-67.

Nemri A, Atwell S, Tarone AM, et al. (2010) Genome-wide survey of Arabidopsis natural variation in downy mildew resistance using combined association and linkage mapping. Proc Natl Acad Sci USA 107(22):10302-7.

Pecinka A, Dinh HQ, Baubec T, et al. (2010) Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis. Plant Cell 22(9):3118-29.

Platt A, Horton M, Huang YS, et al. (2010) The scale of population structure in Arabidopsis thaliana. PLoS Genet 6:e1000843.

Platt A, Vilhjálmsson BJ, Nordborg M (2010) Conditions under which genome-wide association studies will be positively misleading. Genetics 186(3):1045-52.

Rozhon W, Mayerhofer J, Petutschnig E, et al. (2010) ASKΘ, a group-III Arabidopsis GSK3, functions in the brassinosteroid signalling pathway. Plant J 62(2):215-23.

Sehr EM, Agusti J, Lehner R, et al. (2010) Analysis of secondary growth in the Arabidopsis shoot reveals a positive role of jasmonate signalling in cambium formation. Plant J 63(5):811-22.

Tamaru H (2010) Confining euchromatin/heterochromatin territory: jumonji crosses the line. Genes Dev 24(14):1465-78.

Todesco M, Balasubramanian S, Hu TT, et al. (2010) Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana. Nature 465(7298):632-6.

Turner TL, Bourne EC, Wettberg EJ, et al. (2010) Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils. Nat Genet 42(3):260-263.

Vrbsky J, Akimcheva S, Watson JM, et al. (2010) siRNA mediated methylation of Arabidopsis telomeres. PLoS Genet 6:e1000986.

Watson JM, Riha K (2010) Comparative biology of telomeres: where plants stand. FEBS Lett 584(17):3752-9.

Yokthongwattana C, Bucher E, Caikovski M, et al. (2010) MOM1 and Pol-IV/V interactions regulate the intensity and specificity of transcriptional gene silencing. EMBO J 29(2):340-51.

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