2013

Publications

Agusti J, Greb T (2013) Going with the wind - adaptive dynamics of plant secondary meristems. Mech Dev 130(1):34-44.

Beleza S, Johnson NA, Candille SI, et al. (2013) Genetic Architecture of Skin and Eye Color  in an African-European Admixed Population. PLoS Genet 9(3): e1003372.

Brackmann K, Greb T (2013) Long- and Short-Distance Signaling in the Regulation of Lateral Plant Growth. Physiol Plant 151(2):134-141.

Bulankova P, Akimcheva S, Fellner N, et al. (2013) Identification of Arabidopsis Meiotic Cyclins Reveals Functional Diversification among Plant Cyclin Genes. PLoS Genet 9(5): e1003508.

Cigliano R, Cremona G, Paparo R, et al. (2013) Histone deacetylase AtHDA7 is required for female gametophyte and embryo development in Arabidopsis. Plant Physiol 163(1):431-40.

Debieu M, Tang C, Stich B, et al.(2013) Co-variation between seed dormancy, growth rate and flowering time changes with latitude in Arabidopsis thaliana. PLoS ONE 8:e61075.

Göhring J, Fulcher N, Jacak J, et al.  (2013) TeloTool: a new tool for telomere length measurement from terminal restriction fragment analysis with improved probe intensity correction. Nucl Acids Re. 42(3):e21.

Ischebeck T, Werner S, Krishnamoorthy P, et al. (2013) Phosphatidylinositol 4,5-Bisphosphate Influences PIN Polarization by Controlling Clathrin-Mediated Membrane Trafficking in Arabidopsis. Plant Cell 25(12):4894-911.

Kaufmann K, Busch W (2013) Plant genomics: from weed to wheat. Genome Biol 14(6):308.

Khan M, Rozhon W, Bigeard J, et al. (2013) Brassinosteroid-regulated GSK3/Shaggy-like kinases phosphorylate mitogen-activated protein (MAP) kinase kinases, which control stomata development in Arabidopsis thaliana. J Biol Chem 288(11):7519-27.

Korte A, Farlow A (2013) The advantages and limitations of trait analysis with GWAS: a review. Plant Methods 9:29.

Long Q, Rabanal FA, Meng D, et al. (2013) Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden. Nat Genet 45(8): 884-90.

Long Q, Zhang Q, Vilhjálmsson BJ, et al. (2013) JAWAMix5: an out-of-core HDF5-based java implementation of whole-genome association studies using mixed models. Bioinformatics 29(9):1220-2.

Ngo Q, Albrecht H, Tsuchimatsu T, et al. (2013) The differentially regulated genes TvQR1 and TvPirin of the parasitic plant Triphysaria exhibit distinctive allelic diversity. BMC Plant Biol 13:28.

Platzer A (2013) Visualization of SNPs with t-SNE. PLoS ONE 8(2): e56883.

Popova OV, Dinh HQ, Aufsatz W, et al. (2013) The RdDM pathway is required for basal heat tolerance in Arabidopsis. Mol Plant 6(2):396-410.

Rehmsmeier M (2013) A computational approach to developing mathematical models of polyploid meiosis. Genetics 193(4):1083-94.

Rosa M, Von Harder M, Cigliano RA, et al. (2013) The Arabidopsis SWR1 Chromatin-Remodeling Complex Is Important for DNA Repair, Somatic Recombination, and Meiosis. Plant Cell 25(6): 1990-2001.

Samanic I, Simunic J, Riha K, et al. (2013) Evidence for distinct functions of MRE11 in Arabidopsis meiosis. PLoS ONE 8(10): e78760.

Sasaki E, Sugino R, Innan H (2013) The linkage method: a novel approach for SNP-detection and haplotype reconstruction from a single diploid individual using next-generation sequence data. Mol Biol Evol 30(9):2187-96.

Slotte T, Hazzouri KM, Ågren JA, et al. (2013). The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nat Genet 45(7):831-5.

Tsuchimatsu T, Shimizu KK (2013) Effects of pollen availability and the mutation bias on the fixation of mutations disabling the male specificity of self-incompatibility. J Evol Biol 26:2221-32.

You W, Lorkovic Z, Matzke A, et al. (2013) Interplay among RNA polymerases II, IV and V in RNA-directed DNA methylation at a low copy transgene locus in Arabidopsis thaliana. Plant Mol Biol 82(1-2):85-96.

Gregor Mendel Institute of
Molecular Plant Biology GmbH


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