2016

Publications

Augustin M, Haxhimusa Y, Busch W, et al. (2016) A framework for the extraction of quantitative traits from 2D images of mature Arabidopsis thaliana. Machine Vision and Applications 27(5):647-61.

Bergelson J, Buckler ES, Ecker JR, et al. (2016) A proposal regarding best practices for validating the identity of genetic stocks and the effects of genetic variants. Plant Cell 28(3):606-9.

Berger F, Bowman JL, Kohchi T (2016) Marchantia. Curr Biol 26(5):R186-7.

Berger F, Geyer PK (2016) Editorial overview: Genome architecture and expression: Connecting genome composition and nuclear architecture with function. Curr Opin Genet Dev 37:iv-vi.

Cifuentes M, Jolivet S, Cromer L, et al. (2016) TDM1 Regulation Determines the Number of Meiotic Divisions. PLoS Genet 12(2):e1005856.

Ćwiek-Kupczyńska H, Altmann T, Arend D, et al. (2016) Measures for interoperability of phenotypic data: minimum information requirements and formatting. Plant Methods 12:44.

Czedik-Eysenberg AB, Arrivault S, Lohse MA, et al. (2016) The interplay between carbon availability and growth in different zones of the growing maize leaf. Plant Physiol 172(2):943-67.

Elsayad K, Werner S,...,Belkhadir Y (2016) Mapping the subcellular mechanical properties of live cells in tissues with fluorescence emission-Brillouin imaging. Sci Signal 9(435):rs5.

Fransz P, Linc G, Lee CR, et al. (2016) Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana. Plant J 88(2):159-178.

Fulcher N, Riha K (2016) Using Centromere Mediated Genome Elimination to Elucidate the Functional Redundancy of Candidate Telomere Binding Proteins in Arabidopsis thaliana. Front Genet 6:349.

Ghosh Dastidar M, Mosiolek M, Bleckmann A, et al. (2016) Sensitive whole mount in situ localization of small RNAs in plants. Plant J 88(4):694-702.

Glover NM, Antoniadi I, George GM, et al. (2016) A Pragmatic Approach to Getting Published: 35 Tips for Early Career Researchers. Front Plant Sci 7:610.

Gursanscky NR, Jouannet V, ... , Greb T (2016) MOL1 is required for cambium homeostasis in Arabidopsis. Plant J 86(3):210-20.

He F, Arce A, Schmitz G (2016) The footprint of polygenic adaptation on stress-responsive cis-regulatory divergence in the Arabidopsis genus. Mol Biol Evol 33(8):2088-101.

Horton MW, Willems G, Sasaki E, et al. (2016) The genetic architecture of freezing tolerance varies across the range of Arabidopsis thaliana. Plant Cell Environ 39(11):2570-9.

Jiang D, Berger F (2016) Histone variants in plant transcriptional regulation. Biochim Biophys Acta 1860(1):123-30.

Jonak C, Stampfl H, Fritz M, et al. (2016) The GSK3/Shaggy-like kinase ASKα contributes to pattern-triggered immunity in Arabidopsis thaliana. Plant Physiol 171(2):1366-77.

Kawakatsu T, Huang SS, Jupe F, et al. (2016) Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions. Cell 166(2): 492–505.

Kazda A, Akimcheva S, Watson JM, et al. (2016) Cell Proliferation Analysis Using EdU Labeling in Whole Plant and Histological Samples of Arabidopsis. Methods Mol Biol 1370:169-82.

Kerdaffrec E, Filiault DL, Korte A, et al. (2016) Multiple alleles at a single locus control seed dormancy in Swedish Arabidopsis. eLife:e22502.

Kimata Y, Higaki T, Kawashima T, et al. (2016) Cytoskeleton dynamics control the first asymmetric cell division in Arabidopsis zygote. Proc Natl Acad Sci USA 113(49):14157-62.

Klasen JR, Barbez E, Meier L, et al. (2016) A multi-marker association method for genome-wide association studies without the need for population structure correction. Nat Commun 7:13299

Leamy LJ, Lee CR, Song Q, et al. (2016) Environmental versus geographical effects on genomic variation in wild soybean (Glycine soja) across its native range in northeast Asia. Ecol Evol 6(17):6332-44.

Lenser T, Graeber K, Cevik ÖS, et al. (2016) Developmental control and plasticity of fruit and seed dimorphism in the brassica Aethionema. Plant Physiol 172(3):1691-707.

Małolepszy A, Mun T, Sandal N, et al.(2016) The LORE1 insertion mutant resource. Plant J 88(2):306-17.

Meng D, Dubin M, Zhang P, et al. (2016) Limited Contribution of DNA Methylation Variation to Expression Regulation in Arabidopsis thaliana. PLoS Genet 12(7):e1006141.

Motomura K, Berger F, Kawashima T, et al (2016) Fertilization-independent cell-fusion between the synergid and central cell in the polycomb mutant. Cell Struct Funct 41(2):121-5.

Mott GA, Thakur S, Smakowska E, et al. (2016) Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation. Genome Biol 17:98.

Nodine MD (2016) Mobile small RNAs: Sperm-companion communication. Nat Plants 2:16041.

Novikova PY, Hohmann N, Nizhynska V, et al. (2016) Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism. Nat Genet 48(9):1077-82.

Ogura T, Busch W (2016) Genotypes, Networks, Phenotypes: Moving Toward Plant Systems Genetics. Annu Rev Cell Dev Biol 32:103-26.

Provart NJ, Alonso J, Assmann SM, et al. (2016) 50 years of Arabidopsis research: highlights and future directions. New Phytol 209(3):921-44.

Rabe F, Bosch J, Stirnberg A, et al. (2016) A complete toolset for the study of Ustilago bromivora and Brachypodium sp. as a fungal-temperate grass pathosystem. eLife 2016;5:e20522.

Rabe F, Seitner D,..., Djamei A (2016) Phytohormone sensing in the biotrophic fungus Ustilago maydis- the dual role of the transcription factor Rss1. Mol Microbiol 102(2):290-305.

Ristova D, Carré C, Pervent M, et al. (2016) Combinatorial interaction network of transcriptomic and phenotypic responses to nitrogen and hormones in the Arabidopsis thaliana root. Sci Signal 9(451):rs13.

Saur IM, Kadota Y, Sklenar J, et al. (2016) NbCSPR underlies age-dependent immune responses to bacterial cold shock protein in Nicotiana benthamiana. Proc Natl Acad Sci USA 113(12):3389-94.

Seren U, Grimm D, Fritz J, et al. (2016) AraPheno: a public database for Arabidopsis thaliana phenotypes. Nucl Acids Res 45(D1):D1054-D1059.

Slovak R, Ogura T, ..., Busch W (2016) Genetic control of root growth: from genes to networks. Ann Bot. 117(1):9-24.

Smakowska E, Kong J, Busch W, Belkhadir Y (2016) Organ-specific regulation of growth-defense tradeoffs by plants. Curr Opin Plant Biol 29:129-137.

Stirnberg A, Djamei A (2016) Characterization of ApB73, a virulence factor important for colonization of Zea mays by the smut Ustilago maydis. Mol Plant Pathol 17(9):1467-79.

The 1001 Genomes Consortium (2016) 1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana. Cell 166(2):481-91.

Van Veen H, Vashisht D, Akman M, et al. (2016) Transcriptomes of eight Arabidopsis thaliana accessions reveal core conserved, genotype- and organ-specific responses to flooding stress. Plant Physiol 172(2):668-89.

Vashisht D, van Veen H, Akman M, et al. (2016) Variation in Arabidopsis flooding responses identifies numerous putative "tolerance genes". Plant Signal Behav 11(11):e1249083.

Watson JM, Platzer A, Kazda A, et al. (2016) Germline replications and somatic mutation accumulation are independent of vegetative life span in Arabidopsis. Proc Natl Acad Sci USA 113(43):12226-31.

Gregor Mendel Institute of
Molecular Plant Biology GmbH


Dr. Bohr-Gasse 3
1030 Vienna, Austria

T: +43 1 79044-9000
F: +43 1 79044-9001
E: office(at)gmi.oeaw.ac.at

TRAVEL DIRECTIONS
LEGAL NOTICE

The Vienna Biocenter in the third district of Vienna has established itself as the premier location for life sciences in Central Europe and is a world-leading international bio-medical research center.

 

Visit the Website