2018

Publications

Ahmed H, Howton TC, Sun Y, Weinberger N, Beklhadir Y, Mukhtar MS (2018) Network biology discovers pathogen contact points in host protein-protein interactomes. Nat Commun 9(1):2312.

Aköz G and Nordborg M. (2018) Genome duplication and reorganization in Aquilegia. bioRxiv:407973.

Alonso C, Ramos-Cruz D, Becker C (2018) The role of plant epigenetics in biotic interactions. New Phytol [epub].

Bosch J (2018) Four proposals for a more reliable scientific literature. SAJS 114(3):1-2

Bouain N, Satbhai SB, Korte A, et al. (2018) Natural allelic variation of the AZI1 gene controls root growth under zinc-limiting condition. PLoS Genet 14(4):e1007304.

Brackmann K, Qi J, Gebert M, et al. (2018) Spatial specificity of auxin responses coordinates wood formation. Nat Commun 9(1):875.

Czedik-Eysenberg A, Seitner S, Ulrich Güldener, et al. (2018) The ‘PhenoBox’, a flexible, automated, open-source plantphenotyping solution. New Phytol [epub].

Dagdas YF, Pandey P, Tumtas Y, et al. (2018) Host autophagy machinery is diverted to the pathogen interface to mediate focal defense responses against the Irish potato famine pathogen. Elife 2018;7:e37476.

Dubin MJ, Mittelsten Scheid O, Becker C (2018) Transposons: a blessing curse. Curr Opin Plant Biol [epub].

Elwira Smakowska-Luzan, G. Adam Mott, ..., Belkhadir Y (2018) An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Nature 553(7688):342-6.

Exposito-Alonso M, Becker C, Schuenemann VJ, et al. (2018) The rate and potential relevance of new mutations in a colonizing plant lineage. PLoS Genet 14(2):e1007155.

Filiault D, Ballerini E, Mandakova T, et al. (2018) The Aquilegia genome: adaptive radiation and an extraordinarily polymorphic chromosome with a unique history. bioRxiv:264101.

Gantner J, Ordon J, Ilse T, et al. (2018) Peripheral infrastructure vectors and an extended set of plant parts for the Modular Cloning system. PLoS One 13(5):e0197185.

Kurzbauer MT, Pradillo M, Kerzendorfer C et al. (2018) Arabidopsis thaliana FANCD2 Promotes Meiotic Crossover Formation. Plant Cell [epub].

Lim TK, Ma Y, Berger F, et al. (2018) Acupuncture and Neural Mechanism in the Management of Low Back Pain-An Update. Medicines (Basel) 5(3):E63.

Macovei A, Donà M, Carbonera D, et al. (2018) DNA Diffusion Assay Applied to Plant Cells. Methods Mol Biol 1743:107-115.

Mickute M, Nainyte M, Vasiliauskaite L, et al. (2018) Animal Hen1 2'-O-methyltransferases as tools for 3'-terminal functionalization and labelling of single-stranded RNAs. Nucleic Acids Res [epub].

Nikitaki Z, Holá M, Donà M, et al. (2018) Integrating plant and animal biology for the search of novel DNA damage biomarkers. Mutat Res 775:21-38.

Osakabe A, Lorkovic ZJ, Kobayashi W, et al. (2018) Histone H2A variants confer specific properties to nucleosomes and impact on chromatin accessibility. Nucleic Acids Res [epub].

Richter J, Watson JM, Stasnik P, et al. (2018) Multiplex mutagenesis of four clustered CrRLK1L with CRISPR/Cas9 exposes their growth regulatory roles in response to metal ions. Sci Rep 8(1):12182.

Ristova D, Giovannetti M, Metesch K, et al. (2018) Natural Genetic Variation Shapes Root System Responses to Phytohormones in Arabidopsis. Plant J [epub].

Robert HS, Park C, Gutièrrez CL, et al. (2018) Maternal auxin supply contributes to early embryo patterning in Arabidopsis. Nat Plants [epub]

Salanenka Y, Verstraeten I, Löfke C, et al. (2018) Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane. Proc Natl Acad Sci USA 115(14):3716-21.

Sasaki E, Frommlet F, Nordborg M (2018) GWAS with Heterogeneous Data: Estimating the Fraction of Phenotypic Variation Mediated by Gene Expression Data. G3 (Bethesda) [epub].

Schandry N, Jacobs JM, Szurek B, et al. (2018) A cautionary TALE: how plant breeding may have favoured expanded TALE repertoires in Xanthomonas. Mol Plant Pathol 19(6):1297-1301.

Sebastiana M, da Silva AB, Matos AR, et al. (2018) Ectomycorrhizal inoculation with Pisolithus tinctorius reduces stress induced by drought in cork oak. Mycorrhiza 28(3):247-258.

Seitner D, Uhse S, ..., Djamei A (2018) The Core Effector Cce1 is Required for Early Infection of Maize by Ustilago maydis. Mol Plant Pathol [epub].

Seren Ü (2018) GWA-Portal: Genome-Wide Association Studies Made Easy. Methods Mol Biol 1761:303-19.

Shibata M, Breuer C, Kawamura A, et al. (2018) GTL1 and DF1 regulate root hair growth through transcriptional repression of ROOT HAIR DEFECTIVE 6-LIKE 4 in Arabidopsis. Development 145(3): dev159707.

Simon L, Rabanal FA, Dubos T, et al. (2018) Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana. Nucleic Acids Res [epub].

Stein JC, Yu Y, Copetti D, et al. (2018) Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nat Genet [epub].

Tsuchimatsu T, Kakui H, Yamazaki M, et al. (2018) Adaptive Reduction of Male Gamete Number in a Selfing Species. bioRxiv:272757.

Ueda M and Berger F (2018) New cues for body axis formation in plant embryos. Curr Opin Plant Biol 47:16-21

Uhse S and Djamei A (2018) Effectors of plant-colonizing fungi and beyond. PLoS Pathog 14(6):e1006992.

Uhse S, Pflug F, ..., Djamei A (2018) In vivo insertion pool sequencing identifies virulence factors in a complex fungal–host interaction. PLoS Biol:e2005129.

Wang H, Jiang D, Axelsson E, et al. (2018) LHP1 interacts with ATRX through plant-specific domains at specific loci targeted by PRC2. Mol Plant [epub].

Wibowo A, Becker C, Durr J, et al. (2018) Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation. Proc Natl Acad Sci USA [epub].

Wójcik AM, Mosiolek M, Karcz J, et al. (2018) Whole Mount in situ Localization of miRNAs and mRNAs During Somatic Embryogenesis in Arabidopsis. Front Plant Sci 9:1277

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